Biological Sciences

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2019
2 Citations (Scopus)

Evaluation of four modelling approaches to estimate nitrous oxide emissions in China's cropland

Yue, Q., Cheng, K., Ogle, S., Hillier, J., Smith, P., Abdalla, M., Sun, J. & Pan, G., 20 Feb 2019, In : Science of the Total Environment. 652, p. 1279-1289 11 p.

Research output: Contribution to journalArticle

Open Access
File
Nitrous Oxide
nitrous oxide
Oxides
modeling
Denitrification
1 Citation (Scopus)

Evaluation of the health risks related to the presence of cyanogenic glycosides in foods other than raw apricot kernels

EFSA Panel on Contaminants in the Food Chain (CONTAM), 11 Apr 2019, In : EFSA Journal. 17, 4, e05662.

Research output: Contribution to journalArticle

Open Access
File
cyanogenic glycosides
Cyanides
cyanides
apricots
Health
1 Downloads (Pure)
Open Access
File
resting metabolic rate
phenotypic correlation
rodent
rodents
metabolism

Evolving social dynamics prime thermal tolerance during a poleward range shift

Wood, C., Fitt, R. N. L. & Lancaster, L. T., Feb 2019, In : Biological Journal of the Linnean Society. 126, 3, p. 574-586 13 p.

Research output: Contribution to journalArticle

cold tolerance
heat tolerance
tolerance
heat
acclimation
1 Citation (Scopus)

Expanding the role of participatory mapping to assess ecosystem service provision in local coastal environments

Burdon, D., Potts, T., McKinley, E., Lew, S., Shilland, R., Gormley, K., Thomson, S. & Forster, R., Oct 2019, In : Ecosystem Services. 39, 16 p., 101009.

Research output: Contribution to journalArticle

service provision
ecosystem service
ecosystem services
stakeholders
Ecosystem
1 Citation (Scopus)
Chemokine CCL20
Gene Duplication
Oncorhynchus mykiss
Fishes
Genome
2 Citations (Scopus)
6 Downloads (Pure)

Exploring temporality in socio-ecological resilience through experiences of the 2015–16 El Niño across the Tropics

Whitfield, S., Beauchamp, E., Boyd, D. S., Burslem, D., Byg, A., Colledge, F., Cutler, M. E. J., Didena, M., Dougill, A., Foody, G., Godbold, J. A., Hazenbosch, M., Hirons, M., Ifejika Speranza, C., Jew, E., Lacambra, C., Mkwambisi, D., Moges, A., Morel, A., Morris, R. & 8 others, Novo, P., Rueda, M., Smith, H., Solan, M., Spencer, T., Thornton, A., Touza, J. & White, P. C. L., 1 Mar 2019, In : Global Environmental Change. 55, p. 1-14 14 p.

Research output: Contribution to journalArticle

Open Access
File
tropics
resilience
ecological system
climate
learning
8 Citations (Scopus)
3 Downloads (Pure)

Extreme Events Reveal an Alimentary Limit on Sustained Maximal Human Energy Expenditure

Thurber, C., Dugas, L. R., Ocobock, C., Carlson, B., Speakman, J. R. & Pontzer, H., 5 Jun 2019, In : Science Advances. 5, 6, eaaw0341.

Research output: Contribution to journalArticle

Open Access
File
extreme event
expenditure
energy
thermoregulation
physical activity
1 Downloads (Pure)

Fast, sensitive and specific detection of Thailand orthohantavirus and its variants using one-step real-time reverse-transcription polymerase chain reaction assay

Raharinosy, V., Heraud, J. M., Rabemananjara, H. A., Telfer, S., Rakoto, D. A. D., Filippone, C. & Reynes, J. M., 6 Aug 2019, In : Viruses. 11, 8, 7 p., 718.

Research output: Contribution to journalArticle

Open Access
File
Thailand
Reverse Transcription
Indian Ocean
Polymerase Chain Reaction
Far East
4 Downloads (Pure)
Open Access
File
Bottle-Nosed Dolphin
Dolphins
Echolocation
Scotland
Acoustics
1 Citation (Scopus)
1 Downloads (Pure)

Forewarned is forearmed: harmonized approaches for early detection of potentially invasive pests and pathogens in sentinel plantings

Morales-Rodríguez, C., Anslan, S., Auger-Rozenberg, M-A., Augustin, S., Baranchikov, Y., Bellahirech, A., Burokiene, D., Cepukoit, D., Cota, E., Davydenko, K., Lehtijärvi, H. T. D., Drenkhan, R., Drenkhan, T., Eschen, R., Franic, I., Glavendekic, M., De Groot, M., Kacprzyk, M., Kenis, M., Kirichenko, N. & 15 others, Matsiakh, I., Musolin, D. L., Nowakowska, J. A., O'Hanlon, R., Prospero, S., Roques, A., Santini, A., Talgo, V., Tedersoo, L., Uimari, A., Vannini, A., Witzell, J., Woodward, S., Zambounis, A. & Cleary, M., 2019, In : NeoBiota. 47, p. 95-123 29 p.

Research output: Contribution to journalArticle

Open Access
File
planting
pests
pathogens
sampling
risk analysis
2 Citations (Scopus)
7 Downloads (Pure)

From citizen science to citizen action: analysing the potential for a digital platform to cultivate attachments to nature

Sharma, N., Greaves, S., Siddharthan, A., Anderson, H. B., Robinson, A-M., Colucci-Gray, L., Wibowo, A. T., Bostock, H., Salisbury, A., Roberts, S., Slawson, D. & Van der Wal, R., 2019, In : Journal of Science Communication. 18, 1

Research output: Contribution to journalArticle

Open Access
File
citizen
science
interview
knowledge
learning
wind farm
strategic planning
Arctic
license
aquaculture

Gene expression analysis of the innate immune system during early rearing and weaning of meagre (Argyrosomus regius)

Campoverde, C., Milne, D. J., Secombes, C. J., Estévez, A., Gisbert, E. & Andree, K. B., Nov 2019, In : Fish & Shellfish Immunology. 94, p. 819-832 14 p.

Research output: Contribution to journalArticle

Argyrosomus regius
weaning
Immune system
immune system
Gene expression
2 Citations (Scopus)

Genetic Factors Associated With Human Physical Activity: Are Your Genes Too Tight To Prevent You Exercising?

Zhang, X. & Speakman, J. R., Apr 2019, In : Endocrinology. 160, 4, p. 840-852 13 p.

Research output: Contribution to journalArticle

Accelerometry
Twin Studies
Human Activities
Receptor, Melanocortin, Type 4
Genome-Wide Association Study
Open Access
File
arsenic
wetting
rice
drying
irrigation

Genome Sequence of “Candidatus Nitrosocosmicus franklandus” C13, a Terrestrial Ammonia-Oxidizing Archaeon

Nicol, G. W., Hink, L., Gubry-Rangin, C., Prosser, J. I. & Lehtovirta-Morley, L. E., Oct 2019, In : Microbiology Resource Announcements. 8, 40, 3 p., e00435-19.

Research output: Contribution to journalArticle

Open Access
File
Archaea
Ammonia
Genome
Carbon Cycle
Metabolic Networks and Pathways
1 Citation (Scopus)
2 Downloads (Pure)

Genome sequencing and transcriptome analyses of the Siberian hamster hypothalamus identify novel mechanisms for seasonal energy balance

Bao, R., Onishi, K. G., Tolla, E., Ebling, F. J. P., Lewis, J. E., Anderson, R. L., Barrett, P., Prendergast, B. J. & Stevenson, T. J., 25 Jun 2019, In : PNAS. 116, 26, p. 13116-13121 6 p.

Research output: Contribution to journalArticle

Open Access
File
Phodopus
Pro-Opiomelanocortin
Gene Expression Profiling
Hypothalamus
Body Weight Changes
silicon
arsenic
rice
shoot
shoots
1 Citation (Scopus)

Germination characteristics of Rhinanthus minor influence field emergence, competitiveness and potential use in restoration projects

Marin, M., Laverack, G., Matthews, S. & Powell, A. A., May 2019, In : Plant Biology. 21, 3, p. 470-479 10 p.

Research output: Contribution to journalArticle

Rhinanthus minor
competitiveness
germination
seed quality
vigor
5 Citations (Scopus)
5 Downloads (Pure)

GPR55 deficiency is associated with increased adiposity and impaired insulin signaling in peripheral metabolic tissues

Lipina, C., Walsh, S. K., Mitchell, S. E., Speakman, J. R., Wainwright, C. L. & Hundal, H. S., 1 Jan 2019, In : The FASEB Journal. 33, 1, p. 1299-1312 14 p.

Research output: Contribution to journalArticle

Open Access
File
Adiposity
G-Protein-Coupled Receptors
Insulin
Tissue
Muscle
2 Downloads (Pure)

Harbour porpoise responses to pile-driving diminish over time

Graham, I. M., Merchant, N. D., Farcas, A., Candido Barton, T. R., Cheney, B., Bono, S. & Thompson, P. M., Jun 2019, In : Royal Society Open Science. 6, 6, 13 p., 190335.

Research output: Contribution to journalArticle

Open Access
File
pile driving
porpoise
harbor
acoustics
echolocation

Heterologous gene expression in the human gut bacteria Eubacterium rectale and Roseburia inulinivorans by means of conjugative plasmids

Sheridan, P. O., Martin, J. C., Minton, N. P., Flint, H. J., O'Toole, P. W. & Scott, K. P., 1 Oct 2019, In : Anaerobe. 59, p. 131-140 10 p.

Research output: Contribution to journalArticle

Eubacterium
Plasmids
Bacteria
Gene Expression
Genetic Vectors

High-Arctic nesting geese occupying less favourable nest sites are more vulnerable to predation

Anderson, H. B., Fuglei, E., Madsen, J. & Van der Wal, R., 18 Jun 2019, In : Polar Research. 38, 3352.

Research output: Contribution to journalArticle

Open Access
File
nest site
Visibility
Ecosystems
nest
predation
3 Citations (Scopus)

How are nitrogen availability, fine-root mass, and nitrogen uptake related empirically? Implications for models and theory

Dybzinski, R., Kelvakis, A., McCabe, J., Panock, S., Anuchitlertchon, K., Vasarhelyi, L., McCormack, M. L., McNickle, G. G., Poorter, H., Trinder, C. & Farrior, C. E., Mar 2019, In : Global Change Biology. 25, 3, p. 885-899 15 p.

Research output: Contribution to journalArticle

Open Access
File
fine root
Nitrogen
Availability
nitrogen
biosphere
1 Citation (Scopus)

Identification, molecular characterization and functional analysis of interleukin (IL)-2 and IL-2like (IL-2L) cytokines in sea bass (Dicentrarchus labrax L.)

Buonocore, F., Gerdol, M., Pallavicini, A., Stocchi, V., Randelli, E., Belardinelli, M. C., Miccoli, A., Saraceni, P. R., Secombes, C. J., Scapigliati, G. & Wang, T., 6 Nov 2019, In : Cytokine. 126, 154898.

Research output: Contribution to journalArticle

Bass
Functional analysis
Interleukins
Interleukin-2
Cytokines
1 Citation (Scopus)

Identification and characterization of three CXC chemokines in Asian swamp eel (Monopterus albus) uncover a third CXCL11_like group in fish

Yuan, H., Li, Y., Han, P., Tian, G., Zhang, W., Guo, H., Xu, Q. & Wang, T., Dec 2019, In : Developmental and Comparative Immunology. 101, 9 p., 103454.

Research output: Contribution to journalArticle

Smegmamorpha
CXC Chemokines
Chemokines
Fishes
Cell Movement
4 Citations (Scopus)
5 Downloads (Pure)

Imaging microstructure of the barley rhizosphere: particle packing and root hair influences

Koebernick, N., Daly, K. R., Keyes, S. D., Bengough, A. G., Brown, L. K., Cooper, L. J., George, T. S., Hallett, P. D., Naveed, M., Raffan, A. & Roose, T., Mar 2019, In : New Phytologist. 221, 4, p. 1878-1889 11 p.

Research output: Contribution to journalArticle

Open Access
File
Rhizosphere
root hairs
Hordeum
microstructure
rhizosphere

Imaging spectroscopy reveals the effects of topography and logging on the leaf chemistry of tropical forest canopy trees

Swinfield, T., Both, S., Riutta, T., Bongalov, B., Elias, D., Majalap-Lee, N., Ostle, N., Svátek, M., Kvasnica, J., Milodowski, D., Jucker, T., Ewers, R. M., Zhang, Y., Johnson, D., Teh, Y. A., Burslem, D. F. R. P., Malhi, Y. & Coomes, D., 17 Dec 2019, In : Global Change Biology. 14 p.

Research output: Contribution to journalArticle

Open Access
File
forest canopy
Topography
tropical forest
Nutrients
spectroscopy

Immune response modulation upon sequential heterogeneous co-infection with Tetracapsuloides bryosalmonae and VHSV in brown trout (Salmo trutta)

Gorgoglione, B., Taylor, N. G. H., Holland, J. W., Feist, S. W. & Secombes, C. J., May 2019, In : Fish and Shellfish Immunology. 88, p. 375-390 16 p.

Research output: Contribution to journalArticle

Salmo trutta
immune response
mixed infection
Fish
Modulation

Immunohistochemical examination of immune cells in adipose tissue of rainbow trout (Oncorhynchus mykiss) following intraperitoneal vaccination

Veenstra, K. A., Alnabulsi, A., Tubbs, L., Ben Arous, J. & Secombes, C. J., Apr 2019, In : Fish & Shellfish Immunology. 87, p. 559-564 6 p.

Research output: Contribution to journalArticle

T-cells
vaccination
antigen
Fish
adipose tissue
4 Citations (Scopus)

Impact of carbohydrate substrate complexity on the diversity of the human colonic microbiota

Chung, W. S. F., Walker, A. W., Vermeiren, J., Sheridan, P. O., Bosscher, D., Garcia-Campayo, V., Parkhill, J., Flint, H. J. & Duncan, S. H., 1 Jan 2019, In : FEMS Microbiology Ecology. 95, 1, fiy201.

Research output: Contribution to journalArticle

Open Access
File
Inulin
Microbiota
carbohydrate
Carbohydrates
Bioreactors
3 Citations (Scopus)

Impact of dietary sucrose on adiposity and glucose homeostasis in C57BL/6J mice depends on mode of ingestion: liquid or solid

Togo, J., Hu, S., Li, M., Niu, C. & Speakman, J. R., Sep 2019, In : Molecular Metabolism. 27, p. 22-32 11 p.

Research output: Contribution to journalArticle

Open Access
File
Dietary Sucrose
Adiposity
Inbred C57BL Mouse
Sucrose
Homeostasis

Impact of increased predation risk on vigilance behaviour in a gregarious waterfowl, the Egyptian goose Alopochen aegyptiaca

Atkins, A., Little, R. M., Redpath, S. M. & Amar, A., Jun 2019, In : Journal of Avian Biology. 50, 6, 8 p., e02121.

Research output: Contribution to journalArticle

vigilance
waterfowl
predation risk
geese
predation

Impact of soil puddling intensity on the root system architecture of rice (Oryza sativa L.) seedlings

Fang, H., Rong, H., Hallett, P. D., Mooney, S. J., Zhang, W., Zhou, H. & Peng, X., Oct 2019, In : Soil and Tillage Research. 193, p. 1-7 7 p.

Research output: Contribution to journalArticle

puddling
root system
root systems
Oryza sativa
rice

Impacts of Enhanced Weathering on biomass production for negative emission technologies and soil hydrology

Butnar, I., Li, PH., Strachan, N., Pereira, J. P., Gambhir, A. & Smith, P., 26 Nov 2019, (Accepted/In press) In : Environmental Research Letters.

Research output: Contribution to journalArticle

Hydrology
Carbon capture
Weathering
Biomass
bioenergy

Imparting water repellency in completely decomposed granite with Tung oil

Lin, H., Lourenço, S. D. N., Yao, T., Zhou, Z., Yeung, A. T., Hallett, P. D., Paton, G. I., Shih, K., Hau, B. C. H. & Cheuk, J. C. Y., 1 Sep 2019, In : Journal of Cleaner Production. 230, p. 1316-1328 13 p.

Research output: Contribution to journalArticle

Granite
granite
Soils
oil
Water
2 Citations (Scopus)
reintroduction
carnivore
carnivores
Scotland
Lynx
8 Citations (Scopus)
8 Downloads (Pure)

Income-based variation in Sustainable Development Goal interaction networks

Lusseau, D. & Mancini, F., Mar 2019, In : Nature Sustainability. 2, 3, p. 242-247 6 p.

Research output: Contribution to journalArticle

Open Access
File
Income
Interaction
Sustainable development
Trade-offs
Income level

Incorporating connectivity into conservation planning for optimal representation of multiple species and ecosystem services

Williams, S. H., Scriven, S. A., Burslem, D. F. R. P., Hill, J. K., Reynolds, G., Agama, A. L., Kugan, F., Maycock, C. R., Khoo, E., Hastie, A. Y. L., Sugau, J. B., Nilus, R., Pereira, J. T., Tsen, S. L. T., Lee, L. Y., Juiling, S., Hodgson, J. A., Cole, L. E. S., Asner, G. P., Evans, L. J. & 1 others, Brodie, J. F., 15 Dec 2019, In : Conservation Biology. 22 p.

Research output: Contribution to journalArticle

conservation planning
ecosystem service
ecosystem services
connectivity
conservation areas
4 Citations (Scopus)

Increased parasite resistance of greater amberjack (Serbia dumerili Risso 1810) juveniles fed a cMOS supplemented diet is associated with upregulation of a discrete set of immune genes in mucosal tissues

Fernández-Montero, Á., Torrecillas, S., Izquierdo, M., Caballero, M. J., Milne, D. J., Secombes, C. J., Sweetman, J., Da Silva, P., Acosta, F. & Montero, D., Mar 2019, In : Fish & Shellfish Immunology. 86, p. 35-45 11 p.

Research output: Contribution to journalArticle

Open Access
File
parasite resistance
Seriola dumerili
Serbia
Nutrition
Defensins
3 Citations (Scopus)
4 Downloads (Pure)

Increasing trends in fecundity and calf survival of bottlenose dolphins in a marine protected area

Cheney, B. J., Thompson, P. M. & Cordes, L. S., 11 Feb 2019, In : Scientific Reports. 9, 9 p., 1767.

Research output: Contribution to journalArticle

Open Access
File
dolphin
fecundity
protected area
cetacean
temporal variation
Salmo salar
Immunologic Monitoring
Myocarditis
Cardiomyopathies
Viruses
1 Downloads (Pure)

Individuals' expected genetic contributions to future generations, reproductive value, and short-term metrics of fitness in free-living song sparrows (Melospiza melodia)

Reid, J. M., Nietlisbach, P., Wolak, M. E., Keller, L. F. & Arcese, P., Jun 2019, In : Evolution Letters. 3, 3, p. 271-285 15 p.

Research output: Contribution to journalArticle

Open Access
File
Sparrows
Social Responsibility
Pedigree
Music
Proxy
1 Citation (Scopus)

Induction of IL-22 protein and IL-22-producing cells in rainbow trout Oncorhynchus mykiss

Hu, Y., Carpio, Y., Scott, C., Alnabulsi, A., Alnabulsi, A., Wang, T., Liu, F., Monte, M., Wang, T. & Secombes, C. J., Dec 2019, In : Developmental and Comparative Immunology. 101, 103449.

Research output: Contribution to journalArticle

Open Access
File
Oncorhynchus mykiss
Proteins
Fishes
Mucous Membrane
Monoclonal Antibodies
10 Citations (Scopus)
4 Downloads (Pure)

Insights into the evolution of the suppressors of cytokine signalling (SOCS) gene family in vertebrates

Wang, B., Wangkahart, E., Secombes, C. J. & Wang, T., 1 Feb 2019, In : Molecular Biology and Evolution. 36, 2, p. 393-411 19 p.

Research output: Contribution to journalArticle

Open Access
File
Vertebrates
vertebrate
cytokines
vertebrates
Cytokines

Investigations into Mining-Induced Stress–Fracture–Seepage Field Coupling Effect Considering the Response of Key Stratum and Composite Aquifer

Zhang, T., Gan, Q., Zhao, Y., Zhu, G., Nie, X., Yang, K. & Li, J., Oct 2019, In : Rock Mechanics and Rock Engineering. 52, 10, p. 4017-4031 15 p.

Research output: Contribution to journalArticle

Aquifers
aquifer
Composite materials
shell
Groundwater
11 Citations (Scopus)
2 Downloads (Pure)

Is oxygen limitation in warming waters a valid mechanism to explain decreased body sizes in aquatic ectotherms?

Audzijonyte, A., Barneche, D. R., Baudron, A. R., Belmaker, J., Clark, T. D., Marshall, C. T., Morrongiello, J. R. & Itai, V. R., Jan 2019, In : Global Ecology and Biogeography. 28, 2, p. 64-77 14 p.

Research output: Contribution to journalArticle

Open Access
File
body size
warming
oxygen
temperature
water
5 Citations (Scopus)

Is the expansion of sugarcane over pasturelands a sustainable strategy for Brazil's bioenergy industry?

Oliveira, D. M. S., Cherubin, M. R., Franco, A. L. C., Santos, A. S., Gelain, J. G., Dias, N. M. S., Diniz, T. R., Almeida, A. N., Feigl, B. J., Davies, C. A., Paustian, K., Karlen, D. L., Smith, P., Cerri, C. C. & Cerri, C. E. P., Mar 2019, In : Renewable and Sustainable Energy Reviews. 102, p. 346-355 10 p.

Research output: Contribution to journalArticle

Open Access
File
Sustainable development
Ecosystems
Industry
Biofuels
Land use

Juvenile morphology of the large Antarctic canopy-forming brown alga, Desmarestia menziesii J. Agardh

Kuepper, F. C., Amsler, C. D., Morley, S., de Reviers, B., Reichardt, A., Peck, L. S. & Peters, A. F., Nov 2019, In : Polar Biology. 42, 11, p. 2097-2103 7 p.

Research output: Contribution to journalArticle

Open Access
File
Phaeophyta
Phaeophyceae
Islands
Seaweed
Diving