Allelic variation in the Helicobacter pylori flagellin genes flaA and flaB: Its consequences for strain typing schemes and population structure

K. J. Forbes, Z. Fang, T. H. Pennington

Research output: Contribution to journalArticle

39 Citations (Scopus)

Abstract

Extensive DNA sequence diversity was noted in Helicobacter pylori flagellin genes flaA and flaB. PCR amplified sequences from 49 isolates were digested with AluI. HindIII. MboI or MspI, the resultant patterns were compared between the different isolates and these used to differentiate the isolates from each other. Evidence that the extensive diversity that was found in these genes is the result of reassortment of sequences between strains in the bacterial population is presented, such that a comparatively small number of individual sequence mutations can recombine together in random combinations to form a greater number of distinct alleles. Geographical differences in the predominant patterns in the flaA alleles were also observed and could reflect regional differences either in the human host population or in the bacterial population. In view of the genetic complexity of this species, molecular typing schemes designed to identify related strains may falsely associate strains if the methods do not characterize sufficient genetic sites to exclude chance associations of genetic markers in strains which are actually not closely related to each other.

Original languageEnglish
Pages (from-to)257-266
Number of pages10
JournalEpidemiology and Infection
Volume114
Issue number2
DOIs
Publication statusPublished - 1 Jan 1995

ASJC Scopus subject areas

  • Epidemiology
  • Infectious Diseases

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