TY - JOUR
T1 - Digital In-Line Holography for Large-Volume Analysis of Vertical Motion of Microscale Marine Plankton and Other Particles
AU - Liu, Zonghua
AU - Takahashi, Tomoko
AU - Lindsay, Dhugal
AU - Thevar, Thangavel
AU - Sangekar, Mehul
AU - Watanabe, Hiromi Kayama
AU - Burns, Nicholas
AU - Watson, John
AU - Thornton, Blair
N1 - Acknowledgements
This work is funded by a joint UK-Japan research program (NERC-JST SICORP Marine Sensor Proof of Concept under project code NE/R01227X/1).
The authors would like to thank the captain, crew, science party and technical support staff of the R/V Yokosuka cruise YK20-E02. We also thank Dr. Y. Nagai for providing us the foraminifera samples.
PY - 2021/10/1
Y1 - 2021/10/1
N2 - Measuring the distribution, characteristics and dynamics of marine microscale plankton and other particulate matter is essential to understand the vertical flux of elements in the marine environment. Digital holographic microscopy is a powerful approach for measuring these and studying their 3-D trajectories in a relatively large observation volume. This article demonstrates a compact, in-line digital holographic microscope that allows large-volume and high-resolution recording of marine particles through combining a continuous wave laser and a short exposure CMOS camera with efficient global shutters. A resolution of better than 10 μm is demonstrated in air and the minimum distinguishable size of targets recorded in water is approximately 20 μm. The maximum volumetric throughput of the setup is 1904 mL/s. The microscope can take motion blur free holograms of particles moving at up to 490 mm/s in theory, and has been tested in the ∼200-mm/s flowing water. The orientation of the measured volume improves the ability of digital holography in profiling sinking rates and active vertical migration. The system was tested onboard a research vessel to record a range of live plankton and other particles. The motion of some samples, including the sinking motion and swimming motion, was analyzed using custom developed image processing software. The experimental results show that the combination of high resolution and a large volume over which motion of sparse-distribution particles can be tracked, can improve the ability to differentiate between different types of marine particle and identify behaviors of live plankton.
AB - Measuring the distribution, characteristics and dynamics of marine microscale plankton and other particulate matter is essential to understand the vertical flux of elements in the marine environment. Digital holographic microscopy is a powerful approach for measuring these and studying their 3-D trajectories in a relatively large observation volume. This article demonstrates a compact, in-line digital holographic microscope that allows large-volume and high-resolution recording of marine particles through combining a continuous wave laser and a short exposure CMOS camera with efficient global shutters. A resolution of better than 10 μm is demonstrated in air and the minimum distinguishable size of targets recorded in water is approximately 20 μm. The maximum volumetric throughput of the setup is 1904 mL/s. The microscope can take motion blur free holograms of particles moving at up to 490 mm/s in theory, and has been tested in the ∼200-mm/s flowing water. The orientation of the measured volume improves the ability of digital holography in profiling sinking rates and active vertical migration. The system was tested onboard a research vessel to record a range of live plankton and other particles. The motion of some samples, including the sinking motion and swimming motion, was analyzed using custom developed image processing software. The experimental results show that the combination of high resolution and a large volume over which motion of sparse-distribution particles can be tracked, can improve the ability to differentiate between different types of marine particle and identify behaviors of live plankton.
KW - Atmospheric measurements
KW - Digital in-line holographic microscopy
KW - holo graphic image processing
KW - Image reconstruction
KW - Image resolution
KW - large-volume recording
KW - marine plank-ton and particle motion tracking
KW - Microscopy
KW - Particle measurements
KW - Sea measurements
KW - Throughput
KW - vertical profiling of particulates
UR - http://www.scopus.com/inward/record.url?scp=85112412437&partnerID=8YFLogxK
U2 - 10.1109/JOE.2021.3066788
DO - 10.1109/JOE.2021.3066788
M3 - Article
AN - SCOPUS:85112412437
VL - 46
SP - 1248
EP - 1260
JO - IEEE Journal of Oceanic Engineering
JF - IEEE Journal of Oceanic Engineering
SN - 0364-9059
IS - 4
ER -