Ensembl 2012

Paul Flicek, M. Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Denise Carvalho-Silva, Peter Clapham, Guy Coates, Susan Fairley, Stephen Fitzgerald, Laurent Gil, Leo Gordon, Maurice Hendrix, Thibaut Hourlier, Nathan Johnson, Andreas K. Kähäri, Damian Keefe, Stephen Keenan, Rhoda Kinsella, Monika Komorowska & 37 others Gautier Koscielny, Eugene Kulesha, Pontus Larsson, Ian Longden, William McLaren, Matthieu Muffato, Bert Overduin, Miguel Pignatelli, Bethan Pritchard, Harpreet Singh Riat, Graham R. S. Ritchie, Magali Ruffier, Michael Schuster, Daniel Sobral, Y. Amy Tang, Kieron Taylor, Stephen Trevanion, Jana Vandrovcova, Simon White, Mark Wilson, Steven P. Wilder, Bronwen L. Aken, Ewan Birney, Fiona Cunningham, Ian Dunham, Richard Durbin, Xosé M. Fernández-Suarez, Jennifer Harrow, Javier Herrero, Tim J. P. Hubbard, Anne Parker, Glenn Proctor, Giulietta Spudich, Jan Vogel, Andy Yates, Amonida Zadissa, Stephen M. J. Searle

Research output: Contribution to journalArticle

719 Citations (Scopus)

Abstract

The Ensembl project (http://www.ensembl.org) provides genome resources for chordate genomes with a particular focus on human genome data as well as data for key model organisms such as mouse, rat and zebrafish. Five additional species were added in the last year including gibbon (Nomascus leucogenys) and Tasmanian devil (Sarcophilus harrisii) bringing the total number of supported species to 61 as of Ensembl release 64 (September 2011). Of these, 55 species appear on the main Ensembl website and six species are provided on the Ensembl preview site (Pre!Ensembl; http://pre.ensembl.org) with preliminary support. The past year has also seen improvements across the project.
Original languageEnglish
Pages (from-to)D84-D90
Number of pages7
JournalNucleic Acids Research
Volume40
Issue numberD1
Early online date15 Nov 2011
DOIs
Publication statusPublished - Jan 2012

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Hylobates
Genome
Chordata
Zebrafish
Human Genome

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Flicek, P., Amode, M. R., Barrell, D., Beal, K., Brent, S., Carvalho-Silva, D., ... Searle, S. M. J. (2012). Ensembl 2012. Nucleic Acids Research, 40(D1), D84-D90. https://doi.org/10.1093/nar/gkr991

Ensembl 2012. / Flicek, Paul; Amode, M. Ridwan; Barrell, Daniel; Beal, Kathryn; Brent, Simon; Carvalho-Silva, Denise; Clapham, Peter; Coates, Guy; Fairley, Susan; Fitzgerald, Stephen; Gil, Laurent; Gordon, Leo; Hendrix, Maurice; Hourlier, Thibaut; Johnson, Nathan; Kähäri, Andreas K.; Keefe, Damian; Keenan, Stephen; Kinsella, Rhoda; Komorowska, Monika; Koscielny, Gautier; Kulesha, Eugene; Larsson, Pontus; Longden, Ian; McLaren, William; Muffato, Matthieu; Overduin, Bert; Pignatelli, Miguel; Pritchard, Bethan; Riat, Harpreet Singh; Ritchie, Graham R. S.; Ruffier, Magali; Schuster, Michael; Sobral, Daniel; Tang, Y. Amy; Taylor, Kieron; Trevanion, Stephen; Vandrovcova, Jana; White, Simon; Wilson, Mark; Wilder, Steven P.; Aken, Bronwen L.; Birney, Ewan; Cunningham, Fiona; Dunham, Ian; Durbin, Richard; Fernández-Suarez, Xosé M.; Harrow, Jennifer; Herrero, Javier; Hubbard, Tim J. P.; Parker, Anne; Proctor, Glenn; Spudich, Giulietta; Vogel, Jan; Yates, Andy; Zadissa, Amonida; Searle, Stephen M. J.

In: Nucleic Acids Research, Vol. 40, No. D1, 01.2012, p. D84-D90.

Research output: Contribution to journalArticle

Flicek, P, Amode, MR, Barrell, D, Beal, K, Brent, S, Carvalho-Silva, D, Clapham, P, Coates, G, Fairley, S, Fitzgerald, S, Gil, L, Gordon, L, Hendrix, M, Hourlier, T, Johnson, N, Kähäri, AK, Keefe, D, Keenan, S, Kinsella, R, Komorowska, M, Koscielny, G, Kulesha, E, Larsson, P, Longden, I, McLaren, W, Muffato, M, Overduin, B, Pignatelli, M, Pritchard, B, Riat, HS, Ritchie, GRS, Ruffier, M, Schuster, M, Sobral, D, Tang, YA, Taylor, K, Trevanion, S, Vandrovcova, J, White, S, Wilson, M, Wilder, SP, Aken, BL, Birney, E, Cunningham, F, Dunham, I, Durbin, R, Fernández-Suarez, XM, Harrow, J, Herrero, J, Hubbard, TJP, Parker, A, Proctor, G, Spudich, G, Vogel, J, Yates, A, Zadissa, A & Searle, SMJ 2012, 'Ensembl 2012', Nucleic Acids Research, vol. 40, no. D1, pp. D84-D90. https://doi.org/10.1093/nar/gkr991
Flicek P, Amode MR, Barrell D, Beal K, Brent S, Carvalho-Silva D et al. Ensembl 2012. Nucleic Acids Research. 2012 Jan;40(D1):D84-D90. https://doi.org/10.1093/nar/gkr991
Flicek, Paul ; Amode, M. Ridwan ; Barrell, Daniel ; Beal, Kathryn ; Brent, Simon ; Carvalho-Silva, Denise ; Clapham, Peter ; Coates, Guy ; Fairley, Susan ; Fitzgerald, Stephen ; Gil, Laurent ; Gordon, Leo ; Hendrix, Maurice ; Hourlier, Thibaut ; Johnson, Nathan ; Kähäri, Andreas K. ; Keefe, Damian ; Keenan, Stephen ; Kinsella, Rhoda ; Komorowska, Monika ; Koscielny, Gautier ; Kulesha, Eugene ; Larsson, Pontus ; Longden, Ian ; McLaren, William ; Muffato, Matthieu ; Overduin, Bert ; Pignatelli, Miguel ; Pritchard, Bethan ; Riat, Harpreet Singh ; Ritchie, Graham R. S. ; Ruffier, Magali ; Schuster, Michael ; Sobral, Daniel ; Tang, Y. Amy ; Taylor, Kieron ; Trevanion, Stephen ; Vandrovcova, Jana ; White, Simon ; Wilson, Mark ; Wilder, Steven P. ; Aken, Bronwen L. ; Birney, Ewan ; Cunningham, Fiona ; Dunham, Ian ; Durbin, Richard ; Fernández-Suarez, Xosé M. ; Harrow, Jennifer ; Herrero, Javier ; Hubbard, Tim J. P. ; Parker, Anne ; Proctor, Glenn ; Spudich, Giulietta ; Vogel, Jan ; Yates, Andy ; Zadissa, Amonida ; Searle, Stephen M. J. / Ensembl 2012. In: Nucleic Acids Research. 2012 ; Vol. 40, No. D1. pp. D84-D90.
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