Ensembl 2013

Paul Flicek; Ikhlak Ahmed; M Ridwan Amode; Daniel Barrell; Kathryn Beal; Simon Brent; Denise Carvalho-Silva; Peter Clapham; Guy Coates; Susan Fairley; Stephen Fitzgerald; Laurent Gil; Carlos García-Girón; Leo Gordon; Thibaut Hourlier; Sarah Hunt; Thomas Juettemann; Andreas K Kähäri; Stephen Keenan; Monika Komorowska; Eugene Kulesha; Ian Longden; Thomas Maurel; William M McLaren; Matthieu Muffato; Rishi Nag; Bert Overduin; Miguel Pignatelli; Bethan Pritchard; Emily Pritchard; Harpreet Singh Riat; Graham R S Ritchie; Magali Ruffier; Michael Schuster; Daniel Sheppard; Daniel Sobral; Kieron Taylor; Anja Thormann; Stephen Trevanion; Simon White; Steven P Wilder; Bronwen L Aken; Ewan Birney; Fiona Cunningham; Ian Dunham; Jennifer Harrow; Javier Herrero; Tim J P Hubbard; Nathan Johnson; Rhoda Kinsella; Anne Parker; Giulietta Spudich; Andy Yates; Amonida Zadissa; Stephen M J Searle

doi:10.1093/nar/gks1236

Ensembl 2013

Paul Flicek, Ikhlak Ahmed, M Ridwan Amode, Daniel Barrell, Kathryn Beal, Simon Brent, Denise Carvalho-Silva, Peter Clapham, Guy Coates, Susan Fairley, Stephen Fitzgerald, Laurent Gil, Carlos García-Girón, Leo Gordon, Thibaut Hourlier, Sarah Hunt, Thomas Juettemann, Andreas K Kähäri, Stephen Keenan, Monika KomorowskaEugene Kulesha, Ian Longden, Thomas Maurel, William M McLaren, Matthieu Muffato, Rishi Nag, Bert Overduin, Miguel Pignatelli, Bethan Pritchard, Emily Pritchard, Harpreet Singh Riat, Graham R S Ritchie, Magali Ruffier, Michael Schuster, Daniel Sheppard, Daniel Sobral, Kieron Taylor, Anja Thormann, Stephen Trevanion, Simon White, Steven P Wilder, Bronwen L Aken, Ewan Birney, Fiona Cunningham, Ian Dunham, Jennifer Harrow, Javier Herrero, Tim J P Hubbard, Nathan Johnson, Rhoda Kinsella, Anne Parker, Giulietta Spudich, Andy Yates, Amonida Zadissa, Stephen M J Searle

Applied Medicine

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813 Citations (Scopus)

Abstract

The Ensembl project (http://www.ensembl.org) provides genome information for sequenced chordate genomes with a particular focus on human, mouse, zebrafish and rat. Our resources include evidenced-based gene sets for all supported species; large-scale whole genome multiple species alignments across vertebrates and clade-specific alignments for eutherian mammals, primates, birds and fish; variation data resources for 17 species and regulation annotations based on ENCODE and other data sets. Ensembl data are accessible through the genome browser at http://www.ensembl.org and through other tools and programmatic interfaces.

Original language	English
Pages (from-to)	D48-D55
Number of pages	8
Journal	Nucleic Acids Research
Volume	41
Issue number	D1
Early online date	30 Nov 2012
DOIs	https://doi.org/10.1093/nar/gks1236
Publication status	Published - Jan 2013

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This article appears in: Database issue

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10.1093/nar/gks1236

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Flicek, P., Ahmed, I., Amode, M. R., Barrell, D., Beal, K., Brent, S., Carvalho-Silva, D., Clapham, P., Coates, G., Fairley, S., Fitzgerald, S., Gil, L., García-Girón, C., Gordon, L., Hourlier, T., Hunt, S., Juettemann, T., Kähäri, A. K., Keenan, S., ... Searle, S. M. J. (2013). Ensembl 2013. Nucleic Acids Research, 41(D1), D48-D55. https://doi.org/10.1093/nar/gks1236

Flicek, P, Ahmed, I, Amode, MR, Barrell, D, Beal, K, Brent, S, Carvalho-Silva, D, Clapham, P, Coates, G, Fairley, S, Fitzgerald, S, Gil, L, García-Girón, C, Gordon, L, Hourlier, T, Hunt, S, Juettemann, T, Kähäri, AK, Keenan, S, Komorowska, M, Kulesha, E, Longden, I, Maurel, T, McLaren, WM, Muffato, M, Nag, R, Overduin, B, Pignatelli, M, Pritchard, B, Pritchard, E, Riat, HS, Ritchie, GRS, Ruffier, M, Schuster, M, Sheppard, D, Sobral, D, Taylor, K, Thormann, A, Trevanion, S, White, S, Wilder, SP, Aken, BL, Birney, E, Cunningham, F, Dunham, I, Harrow, J, Herrero, J, Hubbard, TJP, Johnson, N, Kinsella, R, Parker, A, Spudich, G, Yates, A, Zadissa, A & Searle, SMJ 2013, 'Ensembl 2013', Nucleic Acids Research, vol. 41, no. D1, pp. D48-D55. https://doi.org/10.1093/nar/gks1236

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Ensembl 2013

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