Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

Ake Olson, A. Aerts, Fred Asiegbu, Lassaad Belbahri, O. Bouzid, A. Brogberg, B. Canback, P. Coutinho, D. Cullen, Kersten Dalman, Giuliana Deflorio, L.T.A. Van Diepen, C. Dunand, S. Duplessis, M. Durling, Paolo Gonthier, J. Grimwood, C. G. Fossdal, D. Hansson, B. Henrissat & 33 others Ari Hietela, K. Himmelstrand, D. Hoffmeister, N. Hogberg, T. James, M. Karlsson, A. Kohler, U. Kues, Y-H. Lee, Y-C. Lin, M. Lind, E. Lundquist, V. Lombard, S. Lucas, K. Lunden, E. Morin, C. Murat, J. Park, T. Raffaello, P. Rouze, A. Salamov, J. Schmutz, Halvor Solheim, J. Stahlberg, H. Velez, R. De Vries, A. Weibenga, Stephen Woodward, I. Yakolev, Matteo Garbelotto, F. Martin, I. Grigoriev, Jan Stenlid

Research output: Contribution to journalArticle

121 Citations (Scopus)

Abstract

Parasitism and saprotrophic wood decay are two fungal strategies fundamental for succession and nutrient cycling in forest ecosystems. An opportunity to assess trade-off between these strategies is provided by the major forest pathogen and wood decayer Heterobasidion annosum sensu lato.We report on the annotated genome sequence and transcript profiling as well as quantitative trait loci mapping of one member of the species complex; H. irregulare. Quantitative trait loci critical for pathogenicity and rich in transposable elements, orphan and secreted genes, were identified.A wide range of cellulose degrading enzymes is expressed during wood decay. In contrast, pathogenic interaction between H. irregulare and pine engages fewer carbohydrate active enzymes, but involves an increase in pectinolytic enzymes, transcription modules for oxidative stress, and secondary metabolite production.Our results show a trade-off in terms of constrained carbohydrate decomposition and membrane transport capacity during interaction with living host. The findings establish that saprotrophic wood decay and necrotrophic parasitism involve two distinct yet overlapping processes.

Original languageEnglish
Pages (from-to)1001-1013
Number of pages13
JournalNew Phytologist
Volume194
Issue number4
Early online date28 Mar 2012
DOIs
Publication statusPublished - Jun 2012

Fingerprint

Fungal Genome
decayed wood
parasitism
genome
pathogens
Quantitative Trait Loci
quantitative trait loci
enzymes
carbohydrates
Heterobasidion annosum
Enzymes
Carbohydrates
transposons
forest ecosystems
secondary metabolites
DNA Transposable Elements
biogeochemical cycles
cellulose
oxidative stress
pathogenicity

Keywords

  • genome
  • Heterobasidion
  • parasitism
  • pathology
  • saprotrophy
  • trade-off
  • wood decay

Cite this

Olson, A., Aerts, A., Asiegbu, F., Belbahri, L., Bouzid, O., Brogberg, A., ... Stenlid, J. (2012). Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. New Phytologist, 194(4), 1001-1013. https://doi.org/10.1111/j.1469-8137.2012.04128.x

Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. / Olson, Ake; Aerts, A.; Asiegbu, Fred; Belbahri, Lassaad; Bouzid, O.; Brogberg, A.; Canback, B.; Coutinho, P.; Cullen, D.; Dalman, Kersten; Deflorio, Giuliana; Van Diepen, L.T.A.; Dunand, C.; Duplessis, S.; Durling, M.; Gonthier, Paolo; Grimwood, J.; Fossdal, C. G.; Hansson, D.; Henrissat, B.; Hietela, Ari; Himmelstrand, K.; Hoffmeister, D.; Hogberg, N.; James, T.; Karlsson, M.; Kohler, A.; Kues, U.; Lee, Y-H.; Lin, Y-C.; Lind, M.; Lundquist, E.; Lombard, V.; Lucas, S.; Lunden, K.; Morin, E.; Murat, C.; Park, J.; Raffaello, T.; Rouze, P.; Salamov, A.; Schmutz, J.; Solheim, Halvor; Stahlberg, J.; Velez, H.; De Vries, R.; Weibenga, A.; Woodward, Stephen; Yakolev, I.; Garbelotto, Matteo; Martin, F.; Grigoriev, I.; Stenlid, Jan.

In: New Phytologist, Vol. 194, No. 4, 06.2012, p. 1001-1013.

Research output: Contribution to journalArticle

Olson, A, Aerts, A, Asiegbu, F, Belbahri, L, Bouzid, O, Brogberg, A, Canback, B, Coutinho, P, Cullen, D, Dalman, K, Deflorio, G, Van Diepen, LTA, Dunand, C, Duplessis, S, Durling, M, Gonthier, P, Grimwood, J, Fossdal, CG, Hansson, D, Henrissat, B, Hietela, A, Himmelstrand, K, Hoffmeister, D, Hogberg, N, James, T, Karlsson, M, Kohler, A, Kues, U, Lee, Y-H, Lin, Y-C, Lind, M, Lundquist, E, Lombard, V, Lucas, S, Lunden, K, Morin, E, Murat, C, Park, J, Raffaello, T, Rouze, P, Salamov, A, Schmutz, J, Solheim, H, Stahlberg, J, Velez, H, De Vries, R, Weibenga, A, Woodward, S, Yakolev, I, Garbelotto, M, Martin, F, Grigoriev, I & Stenlid, J 2012, 'Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen' New Phytologist, vol. 194, no. 4, pp. 1001-1013. https://doi.org/10.1111/j.1469-8137.2012.04128.x
Olson, Ake ; Aerts, A. ; Asiegbu, Fred ; Belbahri, Lassaad ; Bouzid, O. ; Brogberg, A. ; Canback, B. ; Coutinho, P. ; Cullen, D. ; Dalman, Kersten ; Deflorio, Giuliana ; Van Diepen, L.T.A. ; Dunand, C. ; Duplessis, S. ; Durling, M. ; Gonthier, Paolo ; Grimwood, J. ; Fossdal, C. G. ; Hansson, D. ; Henrissat, B. ; Hietela, Ari ; Himmelstrand, K. ; Hoffmeister, D. ; Hogberg, N. ; James, T. ; Karlsson, M. ; Kohler, A. ; Kues, U. ; Lee, Y-H. ; Lin, Y-C. ; Lind, M. ; Lundquist, E. ; Lombard, V. ; Lucas, S. ; Lunden, K. ; Morin, E. ; Murat, C. ; Park, J. ; Raffaello, T. ; Rouze, P. ; Salamov, A. ; Schmutz, J. ; Solheim, Halvor ; Stahlberg, J. ; Velez, H. ; De Vries, R. ; Weibenga, A. ; Woodward, Stephen ; Yakolev, I. ; Garbelotto, Matteo ; Martin, F. ; Grigoriev, I. ; Stenlid, Jan. / Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen. In: New Phytologist. 2012 ; Vol. 194, No. 4. pp. 1001-1013.
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T1 - Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

AU - Olson, Ake

AU - Aerts, A.

AU - Asiegbu, Fred

AU - Belbahri, Lassaad

AU - Bouzid, O.

AU - Brogberg, A.

AU - Canback, B.

AU - Coutinho, P.

AU - Cullen, D.

AU - Dalman, Kersten

AU - Deflorio, Giuliana

AU - Van Diepen, L.T.A.

AU - Dunand, C.

AU - Duplessis, S.

AU - Durling, M.

AU - Gonthier, Paolo

AU - Grimwood, J.

AU - Fossdal, C. G.

AU - Hansson, D.

AU - Henrissat, B.

AU - Hietela, Ari

AU - Himmelstrand, K.

AU - Hoffmeister, D.

AU - Hogberg, N.

AU - James, T.

AU - Karlsson, M.

AU - Kohler, A.

AU - Kues, U.

AU - Lee, Y-H.

AU - Lin, Y-C.

AU - Lind, M.

AU - Lundquist, E.

AU - Lombard, V.

AU - Lucas, S.

AU - Lunden, K.

AU - Morin, E.

AU - Murat, C.

AU - Park, J.

AU - Raffaello, T.

AU - Rouze, P.

AU - Salamov, A.

AU - Schmutz, J.

AU - Solheim, Halvor

AU - Stahlberg, J.

AU - Velez, H.

AU - De Vries, R.

AU - Weibenga, A.

AU - Woodward, Stephen

AU - Yakolev, I.

AU - Garbelotto, Matteo

AU - Martin, F.

AU - Grigoriev, I.

AU - Stenlid, Jan

PY - 2012/6

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N2 - Parasitism and saprotrophic wood decay are two fungal strategies fundamental for succession and nutrient cycling in forest ecosystems. An opportunity to assess trade-off between these strategies is provided by the major forest pathogen and wood decayer Heterobasidion annosum sensu lato.We report on the annotated genome sequence and transcript profiling as well as quantitative trait loci mapping of one member of the species complex; H. irregulare. Quantitative trait loci critical for pathogenicity and rich in transposable elements, orphan and secreted genes, were identified.A wide range of cellulose degrading enzymes is expressed during wood decay. In contrast, pathogenic interaction between H. irregulare and pine engages fewer carbohydrate active enzymes, but involves an increase in pectinolytic enzymes, transcription modules for oxidative stress, and secondary metabolite production.Our results show a trade-off in terms of constrained carbohydrate decomposition and membrane transport capacity during interaction with living host. The findings establish that saprotrophic wood decay and necrotrophic parasitism involve two distinct yet overlapping processes.

AB - Parasitism and saprotrophic wood decay are two fungal strategies fundamental for succession and nutrient cycling in forest ecosystems. An opportunity to assess trade-off between these strategies is provided by the major forest pathogen and wood decayer Heterobasidion annosum sensu lato.We report on the annotated genome sequence and transcript profiling as well as quantitative trait loci mapping of one member of the species complex; H. irregulare. Quantitative trait loci critical for pathogenicity and rich in transposable elements, orphan and secreted genes, were identified.A wide range of cellulose degrading enzymes is expressed during wood decay. In contrast, pathogenic interaction between H. irregulare and pine engages fewer carbohydrate active enzymes, but involves an increase in pectinolytic enzymes, transcription modules for oxidative stress, and secondary metabolite production.Our results show a trade-off in terms of constrained carbohydrate decomposition and membrane transport capacity during interaction with living host. The findings establish that saprotrophic wood decay and necrotrophic parasitism involve two distinct yet overlapping processes.

KW - genome

KW - Heterobasidion

KW - parasitism

KW - pathology

KW - saprotrophy

KW - trade-off

KW - wood decay

U2 - 10.1111/j.1469-8137.2012.04128.x

DO - 10.1111/j.1469-8137.2012.04128.x

M3 - Article

VL - 194

SP - 1001

EP - 1013

JO - New Phytologist

JF - New Phytologist

SN - 0028-646X

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ER -