Large-scale plant ionomics

John M.C. Danku, Brett Lahner, Elena Yakubova, David E. Salt

Research output: Chapter in Book/Report/Conference proceedingChapter

9 Citations (Scopus)

Abstract

Large-scale phenotyping methods are at the heart of efficiently deciphering the functions of genes and gene networks in the postgenomic era. In order to obtain meaningful results when comparing natural variants, and mutants and wild-types during large-scale quantitative analyses, necessary precautions must be employed throughout the whole process. Here, we describe large-scale elemental profiling in Arabidopsis thaliana and other genetic model organisms using high-throughput analytical methodologies. We also include a description of workflow management and data storage systems.
Original languageEnglish
Title of host publicationPlant mineral nutrients
Subtitle of host publicationmethods and protocols
EditorsFrans J.M. Maathius
Place of PublicationLondon
PublisherHumana Press
Pages255-276
Number of pages22
ISBN (Electronic)978-1-62703-152-3
ISBN (Print)9781627031516
DOIs
Publication statusPublished - 1 Jan 2013

Publication series

NameMethods in Molecular Microbiology
PublisherHumana Press
Volume953
ISSN (Print)1064-3745

Fingerprint

Arabidopsis thaliana
phenotype
mutants
organisms
methodology
genes
ionomics
gene regulatory networks

Keywords

  • plant ionome
  • functional genomics
  • high-throughput ion profiling
  • elemental analysis
  • mineral nutrients

Cite this

Danku, J. M. C., Lahner, B., Yakubova, E., & Salt, D. E. (2013). Large-scale plant ionomics. In F. J. M. Maathius (Ed.), Plant mineral nutrients : methods and protocols (pp. 255-276). (Methods in Molecular Microbiology; Vol. 953). London: Humana Press. https://doi.org/10.1007/978-1-62703-152-3_17

Large-scale plant ionomics. / Danku, John M.C.; Lahner, Brett; Yakubova, Elena; Salt, David E. .

Plant mineral nutrients : methods and protocols. ed. / Frans J.M. Maathius. London : Humana Press, 2013. p. 255-276 (Methods in Molecular Microbiology; Vol. 953).

Research output: Chapter in Book/Report/Conference proceedingChapter

Danku, JMC, Lahner, B, Yakubova, E & Salt, DE 2013, Large-scale plant ionomics. in FJM Maathius (ed.), Plant mineral nutrients : methods and protocols. Methods in Molecular Microbiology, vol. 953, Humana Press, London, pp. 255-276. https://doi.org/10.1007/978-1-62703-152-3_17
Danku JMC, Lahner B, Yakubova E, Salt DE. Large-scale plant ionomics. In Maathius FJM, editor, Plant mineral nutrients : methods and protocols. London: Humana Press. 2013. p. 255-276. (Methods in Molecular Microbiology). https://doi.org/10.1007/978-1-62703-152-3_17
Danku, John M.C. ; Lahner, Brett ; Yakubova, Elena ; Salt, David E. . / Large-scale plant ionomics. Plant mineral nutrients : methods and protocols. editor / Frans J.M. Maathius. London : Humana Press, 2013. pp. 255-276 (Methods in Molecular Microbiology).
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