Resolving taxonomic uncertainty in vulnerable elasmobranchs

are the Madeira skate (Raja maderensis) and the thornback ray (Raja clavata) distinct species?

Rachel E. Ball, Barbara Serra-Pereira, Jim Ellis, Martin J. Genner, Samuel Iglesias, Andrew F. Johnson, Catherine S. Jones, Rob Leslie, Jennifer Lewis, Stefano Mariani, Gui Menezes, Francis Neat, Leslie R. Noble, David W. Sims, Andrew M. Griffiths

Research output: Contribution to journalArticle

10 Citations (Scopus)
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Abstract

Skates and rays constitute the most speciose group of chondrichthyan fishes, yet are characterised by remarkable levels of morphological and ecological conservatism. They can be challenging to identify, which makes monitoring species compositions for fisheries management purposes problematic. Owing to their slow growth and low fecundity, skates are vulnerable to exploitation and species exhibiting endemism or limited ranges are considered to be the most at risk. The Madeira skate Raja maderensis is endemic and classified as ‘Data Deficient’ by the IUCN, yet its taxonomic distinctiveness from the morphologically similar and more wide-ranging thornback ray Raja clavata is unresolved. This study evaluated the sequence divergence of both the variable control region and cytochrome oxidase I ‘DNA barcode’ gene of the mitochondrial genome to elucidate the genetic differentiation of specimens identified as R. maderensis and R. clavata collected across much of their geographic ranges. Genetic evidence was insufficient to support the different species designations. However regardless of putative species identification, individuals occupying waters around the Azores and North African Seamounts represent an evolutionarily significant unit worthy of special consideration for conservation management.
Original languageEnglish
Pages (from-to)565-576
Number of pages12
JournalConservation Genetics
Volume17
Issue number3
Early online date11 Feb 2016
DOIs
Publication statusPublished - Jun 2016

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Raja clavata
Skates (Fish)
Elasmobranchii
Raja
Rajidae
Uncertainty
Azores
uncertainty
Fisheries
Mitochondrial Genome
Electron Transport Complex IV
Politics
Fertility
Fishes
DNA barcoding
fisheries management
cytochrome-c oxidase
Water
DNA
conservation management

Keywords

  • phylogeography
  • population genetics
  • phylogenetics
  • D-Loop
  • fisheries management
  • marine conservation

Cite this

Resolving taxonomic uncertainty in vulnerable elasmobranchs : are the Madeira skate (Raja maderensis) and the thornback ray (Raja clavata) distinct species? / Ball, Rachel E.; Serra-Pereira, Barbara; Ellis, Jim ; Genner, Martin J.; Iglesias, Samuel; Johnson, Andrew F.; Jones, Catherine S.; Leslie, Rob; Lewis, Jennifer; Mariani, Stefano; Menezes, Gui; Neat, Francis; Noble, Leslie R.; Sims, David W.; Griffiths, Andrew M.

In: Conservation Genetics, Vol. 17, No. 3, 06.2016, p. 565-576.

Research output: Contribution to journalArticle

Ball, RE, Serra-Pereira, B, Ellis, J, Genner, MJ, Iglesias, S, Johnson, AF, Jones, CS, Leslie, R, Lewis, J, Mariani, S, Menezes, G, Neat, F, Noble, LR, Sims, DW & Griffiths, AM 2016, 'Resolving taxonomic uncertainty in vulnerable elasmobranchs: are the Madeira skate (Raja maderensis) and the thornback ray (Raja clavata) distinct species?', Conservation Genetics, vol. 17, no. 3, pp. 565-576. https://doi.org/10.1007/s10592-015-0806-1
Ball, Rachel E. ; Serra-Pereira, Barbara ; Ellis, Jim ; Genner, Martin J. ; Iglesias, Samuel ; Johnson, Andrew F. ; Jones, Catherine S. ; Leslie, Rob ; Lewis, Jennifer ; Mariani, Stefano ; Menezes, Gui ; Neat, Francis ; Noble, Leslie R. ; Sims, David W. ; Griffiths, Andrew M. / Resolving taxonomic uncertainty in vulnerable elasmobranchs : are the Madeira skate (Raja maderensis) and the thornback ray (Raja clavata) distinct species?. In: Conservation Genetics. 2016 ; Vol. 17, No. 3. pp. 565-576.
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abstract = "Skates and rays constitute the most speciose group of chondrichthyan fishes, yet are characterised by remarkable levels of morphological and ecological conservatism. They can be challenging to identify, which makes monitoring species compositions for fisheries management purposes problematic. Owing to their slow growth and low fecundity, skates are vulnerable to exploitation and species exhibiting endemism or limited ranges are considered to be the most at risk. The Madeira skate Raja maderensis is endemic and classified as ‘Data Deficient’ by the IUCN, yet its taxonomic distinctiveness from the morphologically similar and more wide-ranging thornback ray Raja clavata is unresolved. This study evaluated the sequence divergence of both the variable control region and cytochrome oxidase I ‘DNA barcode’ gene of the mitochondrial genome to elucidate the genetic differentiation of specimens identified as R. maderensis and R. clavata collected across much of their geographic ranges. Genetic evidence was insufficient to support the different species designations. However regardless of putative species identification, individuals occupying waters around the Azores and North African Seamounts represent an evolutionarily significant unit worthy of special consideration for conservation management.",
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note = "We are grateful to all those who helped with sample collection. This includes the MEDITS survey programme (IEO Mallorca) for Mediterranean samples. Portugal mainland samples were collected under the EU Data Collection Framework (DCF, PNAB). Azores specimens from the Department of Oceanography and Fisheries (DOP) of the University of the Azores (UAc) were collected under the project DEMERSAIS “Monitoriza{\cc}{\~a}o das esp{\'e}cies demersais dos A{\cc}ores” financed by the Azorean government, and the project DEECON “Unravelling population connectivity for sustainable fisheries in the Deep Sea” project approved by the European Science Foundation (ESF) under the EUROCORES programme (proposal No 06-EuroDEEP-FP-008 & SFRH-EuroDEEP/0002/2007). This study was funded by the UK Natural Environment Research Council (NERC) Oceans 2025 Strategic Research Programme Theme 6 (Science for Sustainable Marine Resources). REB was supported by the Fisheries Society of the British Isles (FSBI), BSP was funded by the Funda{\cc}{\~a}o para a Ci{\^e}ncia e a Tecnologia, SFRH/BPD/72351/2010 and JL was supported by The Alasdair Downes Marine Conservation Fund. Correction to: Conservation Genetics (2016) 17:565–576 https://doi.org/10.1007/s10592-015-0806-1 Ball, R.E., Serra-Pereira, B., Ellis, J. et al. Conserv Genet (2018). https://doi.org/10.1007/s10592-018-1094-3",
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AU - Serra-Pereira, Barbara

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AU - Genner, Martin J.

AU - Iglesias, Samuel

AU - Johnson, Andrew F.

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N1 - We are grateful to all those who helped with sample collection. This includes the MEDITS survey programme (IEO Mallorca) for Mediterranean samples. Portugal mainland samples were collected under the EU Data Collection Framework (DCF, PNAB). Azores specimens from the Department of Oceanography and Fisheries (DOP) of the University of the Azores (UAc) were collected under the project DEMERSAIS “Monitorização das espécies demersais dos Açores” financed by the Azorean government, and the project DEECON “Unravelling population connectivity for sustainable fisheries in the Deep Sea” project approved by the European Science Foundation (ESF) under the EUROCORES programme (proposal No 06-EuroDEEP-FP-008 & SFRH-EuroDEEP/0002/2007). This study was funded by the UK Natural Environment Research Council (NERC) Oceans 2025 Strategic Research Programme Theme 6 (Science for Sustainable Marine Resources). REB was supported by the Fisheries Society of the British Isles (FSBI), BSP was funded by the Fundação para a Ciência e a Tecnologia, SFRH/BPD/72351/2010 and JL was supported by The Alasdair Downes Marine Conservation Fund. Correction to: Conservation Genetics (2016) 17:565–576 https://doi.org/10.1007/s10592-015-0806-1 Ball, R.E., Serra-Pereira, B., Ellis, J. et al. Conserv Genet (2018). https://doi.org/10.1007/s10592-018-1094-3

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N2 - Skates and rays constitute the most speciose group of chondrichthyan fishes, yet are characterised by remarkable levels of morphological and ecological conservatism. They can be challenging to identify, which makes monitoring species compositions for fisheries management purposes problematic. Owing to their slow growth and low fecundity, skates are vulnerable to exploitation and species exhibiting endemism or limited ranges are considered to be the most at risk. The Madeira skate Raja maderensis is endemic and classified as ‘Data Deficient’ by the IUCN, yet its taxonomic distinctiveness from the morphologically similar and more wide-ranging thornback ray Raja clavata is unresolved. This study evaluated the sequence divergence of both the variable control region and cytochrome oxidase I ‘DNA barcode’ gene of the mitochondrial genome to elucidate the genetic differentiation of specimens identified as R. maderensis and R. clavata collected across much of their geographic ranges. Genetic evidence was insufficient to support the different species designations. However regardless of putative species identification, individuals occupying waters around the Azores and North African Seamounts represent an evolutionarily significant unit worthy of special consideration for conservation management.

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KW - phylogeography

KW - population genetics

KW - phylogenetics

KW - D-Loop

KW - fisheries management

KW - marine conservation

U2 - 10.1007/s10592-015-0806-1

DO - 10.1007/s10592-015-0806-1

M3 - Article

VL - 17

SP - 565

EP - 576

JO - Conservation Genetics

JF - Conservation Genetics

SN - 1566-0621

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