Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation

María Soler Artigas, Louise V Wain, Suzanne Miller, Abdul Kader Kheirallah, Jennifer E Huffman, Ioanna Ntalla, Nick Shrine, Ma'en Obeidat, Holly Trochet, Wendy L McArdle, Alexessander Couto Alves, Jennie Hui, Jing Hua Zhao, Peter K Joshi, Alexander Teumer, Eva Albrecht, Medea Imboden, Rajesh Rawal, Lorna M Lopez, Jonathan Marten & 31 others Stefan Enroth, Ida Surakka, Ozren Polasek, Leo-Pekka Lyytikäinen, Raquel Granell, Pirro G Hysi, Claudia Flexeder, Anubha Mahajan, John Beilby, Yohan Bossé, Corry-Anke Brandsma, Harry Campbell, Christian Gieger, Sven Gläser, Juan R González, Harald Grallert, Chris J Hammond, Sarah E Harris, Anna-Liisa Hartikainen, Markku Heliövaara, John Henderson, Lynne Hocking, Momoko Horikoshi, Nina Hutri-Kähönen, Erik Ingelsson, Åsa Johansson, John P Kemp, Ivana Kolcic, Ashish Kumar, Lars Lind, UK BiLEVE

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Abstract

Lung function measures are used in the diagnosis of chronic obstructive pulmonary disease. In 38,199 European ancestry individuals, we studied genome-wide association of forced expiratory volume in 1 s (FEV1), forced vital capacity (FVC) and FEV1/FVC with 1000 Genomes Project (phase 1)-imputed genotypes and followed up top associations in 54,550 Europeans. We identify 14 novel loci (P<5 × 10(-8)) in or near ENSA, RNU5F-1, KCNS3, AK097794, ASTN2, LHX3, CCDC91, TBX3, TRIP11, RIN3, TEKT5, LTBP4, MN1 and AP1S2, and two novel signals at known loci NPNT and GPR126, providing a basis for new understanding of the genetic determinants of these traits and pulmonary diseases in which they are altered.

Original languageEnglish
Article number8658
Number of pages12
JournalNature Communications
Volume6
Early online date4 Dec 2015
DOIs
Publication statusPublished - Dec 2015

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Pulmonary diseases
genome
Vital Capacity
Forced Expiratory Volume
loci
lungs
Genes
Genome
Lung
determinants
Chronic Obstructive Pulmonary Disease
Lung Diseases
Genotype

Cite this

Artigas, M. S., Wain, L. V., Miller, S., Kheirallah, A. K., Huffman, J. E., Ntalla, I., ... UK BiLEVE (2015). Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation. Nature Communications, 6, [8658]. https://doi.org/10.1038/ncomms9658

Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation. / Artigas, María Soler; Wain, Louise V; Miller, Suzanne; Kheirallah, Abdul Kader; Huffman, Jennifer E; Ntalla, Ioanna; Shrine, Nick; Obeidat, Ma'en; Trochet, Holly; McArdle, Wendy L; Alves, Alexessander Couto; Hui, Jennie; Zhao, Jing Hua; Joshi, Peter K; Teumer, Alexander; Albrecht, Eva; Imboden, Medea; Rawal, Rajesh; Lopez, Lorna M; Marten, Jonathan; Enroth, Stefan; Surakka, Ida; Polasek, Ozren; Lyytikäinen, Leo-Pekka; Granell, Raquel; Hysi, Pirro G; Flexeder, Claudia; Mahajan, Anubha; Beilby, John; Bossé, Yohan; Brandsma, Corry-Anke; Campbell, Harry; Gieger, Christian; Gläser, Sven; González, Juan R; Grallert, Harald; Hammond, Chris J; Harris, Sarah E; Hartikainen, Anna-Liisa; Heliövaara, Markku; Henderson, John; Hocking, Lynne; Horikoshi, Momoko; Hutri-Kähönen, Nina; Ingelsson, Erik; Johansson, Åsa; Kemp, John P; Kolcic, Ivana; Kumar, Ashish; Lind, Lars; UK BiLEVE.

In: Nature Communications, Vol. 6, 8658, 12.2015.

Research output: Contribution to journalArticle

Artigas, MS, Wain, LV, Miller, S, Kheirallah, AK, Huffman, JE, Ntalla, I, Shrine, N, Obeidat, M, Trochet, H, McArdle, WL, Alves, AC, Hui, J, Zhao, JH, Joshi, PK, Teumer, A, Albrecht, E, Imboden, M, Rawal, R, Lopez, LM, Marten, J, Enroth, S, Surakka, I, Polasek, O, Lyytikäinen, L-P, Granell, R, Hysi, PG, Flexeder, C, Mahajan, A, Beilby, J, Bossé, Y, Brandsma, C-A, Campbell, H, Gieger, C, Gläser, S, González, JR, Grallert, H, Hammond, CJ, Harris, SE, Hartikainen, A-L, Heliövaara, M, Henderson, J, Hocking, L, Horikoshi, M, Hutri-Kähönen, N, Ingelsson, E, Johansson, Å, Kemp, JP, Kolcic, I, Kumar, A, Lind, L & UK BiLEVE 2015, 'Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation' Nature Communications, vol. 6, 8658. https://doi.org/10.1038/ncomms9658
Artigas, María Soler ; Wain, Louise V ; Miller, Suzanne ; Kheirallah, Abdul Kader ; Huffman, Jennifer E ; Ntalla, Ioanna ; Shrine, Nick ; Obeidat, Ma'en ; Trochet, Holly ; McArdle, Wendy L ; Alves, Alexessander Couto ; Hui, Jennie ; Zhao, Jing Hua ; Joshi, Peter K ; Teumer, Alexander ; Albrecht, Eva ; Imboden, Medea ; Rawal, Rajesh ; Lopez, Lorna M ; Marten, Jonathan ; Enroth, Stefan ; Surakka, Ida ; Polasek, Ozren ; Lyytikäinen, Leo-Pekka ; Granell, Raquel ; Hysi, Pirro G ; Flexeder, Claudia ; Mahajan, Anubha ; Beilby, John ; Bossé, Yohan ; Brandsma, Corry-Anke ; Campbell, Harry ; Gieger, Christian ; Gläser, Sven ; González, Juan R ; Grallert, Harald ; Hammond, Chris J ; Harris, Sarah E ; Hartikainen, Anna-Liisa ; Heliövaara, Markku ; Henderson, John ; Hocking, Lynne ; Horikoshi, Momoko ; Hutri-Kähönen, Nina ; Ingelsson, Erik ; Johansson, Åsa ; Kemp, John P ; Kolcic, Ivana ; Kumar, Ashish ; Lind, Lars ; UK BiLEVE. / Sixteen new lung function signals identified through 1000 Genomes Project reference panel imputation. In: Nature Communications. 2015 ; Vol. 6.
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AU - Huffman, Jennifer E

AU - Ntalla, Ioanna

AU - Shrine, Nick

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