Soil microbial carbon turnover decreases with increasing molecular size

Ashish Malik, Evgenia Blagodatskaya, Gerd Gleixner*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

34 Citations (Scopus)


It is well established that soil microorganisms play an important role in respiration of newly fixed plant carbon. Recent results show that they also contribute significantly to soil organic matter (SOM) formation. We hypothesized that different molecular size classes of compounds in soil microbial biomass (SMB) have variable turnover time and in consequence influence SOM formation differentially. Here we used natural differences in carbon stable isotope signatures (δ13C values) after C3-C4 vegetation change to track newly fixed C4 plant carbon into SMB molecular size classes. SMB was obtained by chloroform fumigation extraction (SFE) and δ13C values of its size classes were measured using size exclusion chromatography coupled online to liquid chromatography-isotope ratio mass spectrometry (SEC-LC-IRMS). Resolved SMB was assigned to 5 size classes of 1800-9800, 800-1800, 380-800, 180-380 and 50-180Da respectively. The contribution of recent C4 plant carbon to size classes of SMB decreased with increasing molecular weight (MW). It ranged from 77±19% in the lowest MW size class size class to 41±14% in the highest MW size class in a sandy soil and from 59±18% in the lowest MW size class to 8±15% in the highest MW size class in a clayey soil. A decreasing carbon turnover of compounds in SMB extracts along a continuum of molecular size from small to large implies that low molecular weight microbial compounds are rapidly metabolized products that link to fast respiratory carbon fluxes, whereas high molecular weight ones could be products of microbial synthesis like structural compounds that have slower turnover rates and link to slower SOM formation. Our methods help avoid contamination of CFE extracts and the results help explain why SMB turnover is faster in CFE extracts when compared to calculations using membrane lipids (e.g. PLFA-based).

Original languageEnglish
Pages (from-to)115-118
Number of pages4
JournalSoil Biology and Biochemistry
Publication statusPublished - 1 Jul 2013


  • Carbon cycling
  • Carbon stable isotopes
  • Chloroform fumigation extraction
  • Molecular size
  • Soil microbial biomass


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