The Family Nitrosomonadaceae

James I. Prosser, Ian M. Head, Lisa Y. Stein

Research output: Chapter in Book/Report/Conference proceedingChapter

39 Citations (Scopus)

Abstract

The Nitrosomonadaceae comprise a monophyletic phylogenetic group within the betaproteobacteria, all of whose cultivated representatives are lithoautotrophic ammonia oxidizers. Ammonia oxidizers generally exert control over nitrification by oxidizing ammonia to nitrite, which is subsequently oxidized by bacterial nitrite oxidizers to nitrate. They therefore play major roles in control of the nitrogen cycle in terrestrial, freshwater, and marine environments and in wastewater treatment processes. They are also of significant economic and environmental importance, leading to loss of ammonium-based fertilizers, nitrous oxide production, and nitrate pollution. Ammonia oxidation is also carried out by thaumarchaea, gammaproteobacteria, and anammox organisms. Phylogeny of the Nitrosomonadaceae is now based on analysis of 16S rRNA genes and amoA genes that encode subunit A of ammonia monooxygenase, which catalyzes the first step in ammonia oxidation. Sequences of cultivated strains and those obtained directly from environmental DNA and RNA suggest two genera, Nitrosomonas and Nitrosospira, each containing seven lineages, although support for these lineages in Nitrosospira is weaker. Two of these lineages are not represented by a laboratory isolate. Genomic analyses are providing insights into the evolution of the Nitrosomonadaceae and into metabolic processes of relevance to ecological studies.

Original languageEnglish
Title of host publicationThe Prokaryotes
Subtitle of host publicationAlphaproteobacteria and Betaproteobacteria
EditorsEugene Rosenberg, Edward F. DeLong, Stephen Lory, Erko Stackebrandt, Fabiano Thompson
Place of PublicationBerlin Heidelberg
PublisherSpringer Berlin / Heidelberg
Pages901-918
Number of pages18
Edition4
ISBN (Electronic)9783642301971
ISBN (Print)9783642301964
DOIs
Publication statusPublished - Nov 2014

Fingerprint

Nitrosomonadaceae
Ammonia
Nitrites
Nitrates
Nitrosomonas
Nitrogen Cycle
Betaproteobacteria
Gammaproteobacteria
Nitrification
Fertilizers
Nitrous Oxide
Phylogeny
Waste Water
Fresh Water
Ammonium Compounds
rRNA Genes
Economics
RNA
DNA

ASJC Scopus subject areas

  • Immunology and Microbiology(all)

Cite this

Prosser, J. I., Head, I. M., & Stein, L. Y. (2014). The Family Nitrosomonadaceae. In E. Rosenberg, E. F. DeLong, S. Lory, E. Stackebrandt, & F. Thompson (Eds.), The Prokaryotes: Alphaproteobacteria and Betaproteobacteria (4 ed., pp. 901-918). Berlin Heidelberg: Springer Berlin / Heidelberg. https://doi.org/10.1007/978-3-642-30197-1_372

The Family Nitrosomonadaceae. / Prosser, James I.; Head, Ian M.; Stein, Lisa Y.

The Prokaryotes: Alphaproteobacteria and Betaproteobacteria. ed. / Eugene Rosenberg; Edward F. DeLong; Stephen Lory; Erko Stackebrandt; Fabiano Thompson. 4. ed. Berlin Heidelberg : Springer Berlin / Heidelberg, 2014. p. 901-918.

Research output: Chapter in Book/Report/Conference proceedingChapter

Prosser, JI, Head, IM & Stein, LY 2014, The Family Nitrosomonadaceae. in E Rosenberg, EF DeLong, S Lory, E Stackebrandt & F Thompson (eds), The Prokaryotes: Alphaproteobacteria and Betaproteobacteria. 4 edn, Springer Berlin / Heidelberg, Berlin Heidelberg, pp. 901-918. https://doi.org/10.1007/978-3-642-30197-1_372
Prosser JI, Head IM, Stein LY. The Family Nitrosomonadaceae. In Rosenberg E, DeLong EF, Lory S, Stackebrandt E, Thompson F, editors, The Prokaryotes: Alphaproteobacteria and Betaproteobacteria. 4 ed. Berlin Heidelberg: Springer Berlin / Heidelberg. 2014. p. 901-918 https://doi.org/10.1007/978-3-642-30197-1_372
Prosser, James I. ; Head, Ian M. ; Stein, Lisa Y. / The Family Nitrosomonadaceae. The Prokaryotes: Alphaproteobacteria and Betaproteobacteria. editor / Eugene Rosenberg ; Edward F. DeLong ; Stephen Lory ; Erko Stackebrandt ; Fabiano Thompson. 4. ed. Berlin Heidelberg : Springer Berlin / Heidelberg, 2014. pp. 901-918
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