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  • Alan Walker

Singled out

Walker, A., Jul 2011, In : Nature Reviews Microbiology. 9, 7, p. 485 1 p.

Research output: Contribution to journalArticle

Sporulation capability and amylosome conservation among diverse human colonic and rumen isolates of the keystone starch-degrader Ruminococcus bromii

Mukhopadhya, I., Morais, S., Laverde-Gomez, J., Sheridan, P. O., Walker, A. W., Kelly, W., Klieve, A. V., Ouwerkerk, D., Duncan, S. H., Louis, P., Koropatkin, N., Cockburn, D., Kibler, R., Cooper, P. J., Sandoval, C., Crost, E., Juge, N., Bayer, E. A. & Flint, H. J., Jan 2018, In : Environmental Microbiology. 20, p. 324-336 13 p.

Research output: Contribution to journalArticle

Open Access
File
18 Citations (Scopus)
12 Downloads (Pure)

Studying the human microbiota

Walker, A. W., Jun 2016, Microbiota of the Human Body: Implications in Health and Disease. Schwiertz, A. (ed.). Switzerland: Springer International Publishing, p. 5-32 28 p. (Advances in Experimental Medicine and Biology; vol. 902).

Research output: Chapter in Book/Report/Conference proceedingChapter

13 Citations (Scopus)

Studying the microbiome and its complexities: an interview with Alan Walker

Walker, A. W., 1 Nov 2018, In : BMC Biology. 16, 1, 2 p., 134.

Research output: Contribution to journalArticle

Open Access
File
5 Downloads (Pure)

Survey of Culture, GoldenGate Assay, Universal Biosensor Assay, and 16S rRNA Gene Sequencing as Alternative Methods of Bacterial Pathogen Detection

Lindsay, B., Pop, M., Antonio, M., Walker, A. W., Mai, V., Ahmed, D., Oundo, J., Tamboura, B., Panchalingam, S., Levine, M. M., Kotloff, K., Li, S., Magder, L. S., Paulson, J. N., Liu, B., Ikumapayi, U., Ebruke, C., Dione, M., Adeyemi, M., Rance, R. & 32 others, Stares, M. D., Ukhanova, M., Barnes, B., Lewis, I., Ahmed, F., Alam, M. T., Amin, R., Siddiqui, S., Ochieng, J. B., Ouma, E., Juma, J., Mailu, E., Omore, R., O'Reilly, C. E., Hannis, J., Manalili, S., Deleon, J., Yasuda, I., Blyn, L., Ranken, R., Li, F., Housley, R., Ecker, D. J., Hossain, M. A., Breiman, R. F., Morris, J. G., McDaniel, T. K., Parkhill, J., Saha, D., Sampath, R., Stine, O. C. & Nataro, J. P., Oct 2013, In : Journal of Clinical Microbiology. 51, 10, p. 3263-3269 7 p.

Research output: Contribution to journalArticle

14 Citations (Scopus)

Targeted restoration of the intestinal microbiota with a simple, defined bacteriotherapy resolves relapsing Clostridium difficile disease in mice

Lawley, T. D., Clare, S., Walker, A. W., Stares, M. D., Connor, T. R., Raisen, C., Goulding, D., Rad, R., Schreiber, F., Brandt, C., Deakin, L. J., Pickard, D. J., Duncan, S. H., Flint, H. J., Clark, T. G., Parkhill, J. & Dougan, G., 25 Oct 2012, In : PLoS Pathogens. 8, 10, 14 p., e1002995.

Research output: Contribution to journalArticle

Open Access
File
346 Citations (Scopus)
4 Downloads (Pure)

Temporal stability of the rumen microbiota in beef cattle, and response to diet and supplements

Snelling, T. J., Auffret, M. D., Duthie, C-A., Stewart, R. D., Watson, M., Dewhurst, R. J., Roehe, R. & Walker, A. W., 19 Nov 2019, In : Animal Microbiome. 1, 1, 14 p., 16.

Research output: Contribution to journalArticle

Open Access
File
3 Downloads (Pure)

The Ecological Dynamics of Fecal Contamination and Salmonella Typhi and Salmonella Paratyphi A in Municipal Kathmandu Drinking Water

Karkey, A., Jombart, T., Walker, A. W., Thompson, C. N., Torres, A., Dongol, S., Tran Vu Thieu, N., Pham Thanh, D., Tran Thi Ngoc, D., Voong Vinh, P., Singer, A. C., Parkhill, J., Thwaites, G., Basnyat, B., Ferguson, N. & Baker, S., 6 Jan 2016, In : PLoS Neglected Tropical Diseases. 10, 1, p. 1-18 18 p., e0004346.

Research output: Contribution to journalArticle

Open Access
File
34 Citations (Scopus)
9 Downloads (Pure)

The environmental stress sensitivities of pathogenic Candida species, including Candida auris, and implications for their spread in the hospital setting

Heaney, H., Laing, J., Paterson, L., Walker, A. W., Gow, N. A. R., Johnson, E. M., MacCallum, D. M. & Brown, A. J. P., Aug 2020, In : Medical Mycology. 58, 6, p. 744-755 11 p.

Research output: Contribution to journalArticle

Open Access
File
1 Citation (Scopus)

The human microbiota and pathogen interactions

Walker, A. W., 15 Oct 2014, Molecular Medical Microbiology. Tang, Y-W., Sussman, M., Liu, D., Poxton, I. & Schwartzman, J. (eds.). 2 ed. Academic Press, Vol. 1. p. 347-356 10 p. 19

Research output: Chapter in Book/Report/Conference proceedingChapter

1 Citation (Scopus)

The impact of different DNA extraction kits and laboratories upon the assessment of human gut microbiota composition by 16S rRNA gene sequencing

Kennedy, N. A., Walker, A. W., Berry, S. H., Duncan, S. H., Farquarson, F. M., Louis, P., Thomson, J. M., Satsangi, J., Flint, H. J., Parkhill, J., Lees, C. W., Hold, G. L. & UK IBD Genetics Consortium, 24 Feb 2014, In : PloS ONE. 9, 2, e88982.

Research output: Contribution to journalArticle

Open Access
File
137 Citations (Scopus)
6 Downloads (Pure)

The Impact of NOD2 Variants on Fecal Microbiota in Crohn’s Disease and Controls Without Gastrointestinal Disease

Kennedy, N. A., Lamb, C. A., Berry, S. H., Walker, A. W., Mansfield, J., Parkes, M., Simpkins, R., Tremelling, M., Nutland, S., UK IBD Genetics Consortium, Parkhill, J., Probert, C., Hold, G. L. & Lees, C. W., Mar 2018, In : Inflammatory Bowel Diseases. 24, 3, p. 583-592 10 p.

Research output: Contribution to journalArticle

Open Access
File
12 Citations (Scopus)
7 Downloads (Pure)

The Intestinal Microbiota Contributes to the Ability of Helminths to Modulate Allergic Inflammation

Zaiss, M. M., Rapin, A., Lebon, L., Dubey, L. K., Mosconi, I., Sarter, K., Piersigilli, A., Menin, L., Walker, A. W., Rougemont, J., Paerewijck, O., Geldhof, P., McCoy, K. D., Macpherson, A. J., Croese, J., Giacomin, P. R., Loukas, A., Junt, T., Marsland, B. J. & Harris, N. L., 17 Nov 2015, In : Immunity. 43, 5, p. 998-1010 13 p.

Research output: Contribution to journalArticle

Open Access
File
182 Citations (Scopus)
6 Downloads (Pure)

Therapeutic modulation of intestinal dysbiosis

Walker, A. W. & Lawley, T. D., Mar 2013, In : Pharmacological Research. 69, 1, p. 75-86 12 p.

Research output: Contribution to journalLiterature review

95 Citations (Scopus)

The transcription factor T-bet regulates intestinal inflammation mediated by interleukin-7 receptor+ innate lymphoid cells

Powell, N., Walker, A. W., Stolarczyk, E., Canavan, J. B., Gökmen, M. R., Marks, E., Jackson, I., Hashim, A., Curtis, M. A., Jenner, R. G., Howard, J. K., Parkhill, J., MacDonald, T. T. & Lord, G. M., 19 Oct 2012, In : Immunity. 37, 4, p. 674-684 11 p.

Research output: Contribution to journalArticle

213 Citations (Scopus)

Time between Collection and Storage Significantly Influences Bacterial Sequence Composition in Sputum Samples from Cystic Fibrosis Respiratory Infections

Cuthbertson, L., Rogers, G. B., Walker, A. W., Oliver, A., Hafiz, T., Hoffman, L. R., Carroll, M. P., Parkhill, J., Bruce, K. D. & van der Gast, C. J., Aug 2014, In : Journal of Clinical Microbiology. 52, 8, p. 3011-3016 6 p.

Research output: Contribution to journalArticle

Open Access
File
24 Citations (Scopus)
5 Downloads (Pure)

TLR Signaling Modulates Side Effects of Anticancer Therapy in the Small Intestine

Frank, M., Hennenberg, E. M., Eyking, A., Rünzi, M., Gerken, G., Scott, P., Parkhill, J., Walker, A. W. & Cario, E., 15 Feb 2015, In : The Journal of Immunology. 194, 4, p. 1983-1995 13 p.

Research output: Contribution to journalArticle

48 Citations (Scopus)

TPL-2 restricts Ccl24-dependent immunity to Heligmosomoides polygyrus

Kannan, Y., Entwistle, L. J., Pelly, V. S., Perez-Lloret, J., Walker, A. W., Ley, S. C. & Wilson, M. S., 31 Jul 2017, In : PLoS Pathogens. 13, 7, 21 p., e1006536.

Research output: Contribution to journalArticle

Open Access
File
1 Citation (Scopus)
5 Downloads (Pure)

Variable alterations of the microbiota, without metabolic or immunological change, following faecal microbiota transplantation in patients with chronic pouchitis

Landy, J., Walker, A. W., Li, J. V., Al-Hassi, H. O., Ronde, E., English, N. R., Mann, E. R., Bernardo, D., McLaughlin, S. D., Parkhill, J., Ciclitira, P. J., Clark, S. K., Knight, S. C. & Hart, A. L., 12 Aug 2015, In : Scientific Reports. 5, 10 p., 12955.

Research output: Contribution to journalArticle

Open Access
File
38 Citations (Scopus)
30 Downloads (Pure)

Welcome to the plasmidome

Walker, A., Jun 2012, In : Nature Reviews Microbiology. 10, 6, p. 379 1 p.

Research output: Contribution to journalArticle

11 Citations (Scopus)

Wheat bran promotes enrichment within the human colonic microbiota of butyrate-producing bacteria that release ferulic acid

Duncan, S. H., Russell, W. R., Quartieri, A., Rossi, M., Parkhill, J., Walker, A. W. & Flint, H. J., 8 Jul 2016, In : Environmental Microbiology. 18, 7, p. 2214-2225 12 p.

Research output: Contribution to journalArticle

Open Access
File
51 Citations (Scopus)
5 Downloads (Pure)

Whole Genome Amplification of Single Bacterial Cells

Scott, P. & Walker, A. W., 21 Nov 2015, Hydrocarbon and Lipid Microbiology Protocols: Isolation and Cultivation. McGenity, T. J., Timmis, K. N. & Nogales Fernández, B. (eds.). Humana Press, p. 29-41 13 p. (Springer Protocols Handbooks).

Research output: Chapter in Book/Report/Conference proceedingChapter