Rhizosphere bacterial community composition responds to arbuscular mycorrhiza, but not to reductions in microbial activity induced by foliar cutting

Mette Vestergård, Frédéric Henry, Juan Ignacio Rangel-Castro, Anders Michelsen, James I Prosser, Søren Christensen

Research output: Contribution to journalArticle

29 Citations (Scopus)

Abstract

Differences in bacterial community composition (BCC) between bulk and rhizosphere soil and between rhizospheres of different plant species are assumed to be strongly governed by quantitative and qualitative rhizodeposit differences. However, data on the relationship between rhizodeposit amounts and BCC are lacking. Other soil microorganisms, e.g. arbuscular mycorrhizal fungi (AMF), may also influence BCC. We simulated foliar herbivory (cutting) to reduce belowground carbon allocation and rhizodeposition of pea plants grown either with or without AMF. This reduced soil respiration, rhizosphere microbial biomass and bacteriovorous protozoan abundance, whereas none of these were affected by AMF. After labelling plants with (13)CO(2), root and rhizosphere soil (13)C enrichment of cut plants were reduced to a higher extent (24-46%) than shoot (13)C enrichment (10-24%). AMF did not affect (13)C enrichment. Despite these clear indications of reduced rhizosphere carbon-input, denaturing gradient gel electrophoresis (DGGE) of 16S rRNA genes PCR-amplified targeting DNA and RNA from rhizosphere soil did not reveal any effects of cutting on banding patterns. In contrast, AMF induced consistent differences in both DNA- and RNA-based DGGE profiles. These results show that a reduction in rhizosphere microbial activity is not necessarily accompanied by changes in BCC, whereas AMF presence inhibits proliferation of some bacterial taxa while stimulating others.
Original languageEnglish
Pages (from-to)78-89
Number of pages12
JournalFEMS Microbiology Ecology
Volume64
Issue number1
Early online date27 Feb 2008
DOIs
Publication statusPublished - Apr 2008

Fingerprint

Mycorrhizae
arbuscular mycorrhiza
Rhizosphere
microbial activity
community composition
rhizosphere
Fungi
fungus
Soil
Denaturing Gradient Gel Electrophoresis
RNA
electrokinesis
Carbon
gel
DNA
Herbivory
soil
biomass allocation
Peas
soil microorganism

Keywords

  • Bacteria
  • Biomass
  • Carbon Dioxide
  • Carbon Isotopes
  • Ecosystem
  • Electrophoresis
  • Fungi
  • Mycorrhizae
  • Peas
  • Plant Roots
  • Soil Microbiology

Cite this

Rhizosphere bacterial community composition responds to arbuscular mycorrhiza, but not to reductions in microbial activity induced by foliar cutting. / Vestergård, Mette; Henry, Frédéric; Rangel-Castro, Juan Ignacio; Michelsen, Anders; Prosser, James I; Christensen, Søren.

In: FEMS Microbiology Ecology, Vol. 64, No. 1, 04.2008, p. 78-89.

Research output: Contribution to journalArticle

Vestergård, Mette ; Henry, Frédéric ; Rangel-Castro, Juan Ignacio ; Michelsen, Anders ; Prosser, James I ; Christensen, Søren. / Rhizosphere bacterial community composition responds to arbuscular mycorrhiza, but not to reductions in microbial activity induced by foliar cutting. In: FEMS Microbiology Ecology. 2008 ; Vol. 64, No. 1. pp. 78-89.
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